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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862185.1_cds_XP_016515224.1_27592
CDS Infomation

[gene=LOC107831942] [db_xref=GeneID:107831942] [protein=putative pectinesterase 11] [protein_id=XP_016515224.1] [location=complement(join(18203..18419,18782..19017,19281..19469,20137..20523))] [gbkey=CDS]
Sequence

ATGGCTTTTCACGGGTACACTGCGATGGTGGTTGTTATATTAGCTATGAGCTATTTACTG
ATTTGTTCTGAAGCTGACTCAAATACTCAATTATCAACTGCAATTTTGATAAAAGTGGAT
CAATCTGGAAATGGAGATTTCAAGAAAATACAAGATGCAATTGACGCAGTACCTTCACAT
AATTCGCAACATATATTTATTTCGGTTAAGCCTGGGATTTACAGAGAAAAAATTGTTGTT
CCTGCGGATAAGCCGTTTATAACAATCAGTGGTAGAAAACCAGTAAACAATACTATAATT
ACAGGGAATGATTTTGGAGATATATTTGAATCCTCTACTTTCACCGTTTTTGCCTCTGAT
TTCGTGGCTCGCCACCTTACAATTCAGAACACATATGGAACAGGAGCTAAAGCAGTAGCA
TTGAGGGTAGAAGGAGATAGAGTTGGCTTCGTGGGTTGTAGAATTAAGTCACATCAGGAC
ACATTACTTGATGATGTTGGGAGGCATTACTACAAAAACTGTTATATAGAAGGGGACACT
GACTTCATATGTGGAAATGGCGCTTCTCTCTTTGAGAAATGCCATTTGCATTCACTTTCA
GAAGGAAATGGGGCTATAACAGCACAACATAGACAATCATCTCAGGAAAATACAGGTTTC
ACCTTTGTTGGATGCAAGATTACTGGAGTGAAGAGTGCAATTCTTGGTAGACCATGGGGT
CCCTATGCCAGAGTAGTTTTTGCCCAAACTTATATGTCAAGCGTCATTCTCCCCTACGGT
TGGGAAGATTGGAATGTCCCCTCCCGACAAAGGACATCATATTTTGCAGAGTACAAGTGT
TATGGGCCAGGTGCAAGTTCAGATAAGAGGGTAAACTGGTTACGGACTTTGTCTAGTGAA
GATGCTGTGCCTTACTTGAAGGAGAGCATTATGGGCCCAAAAAGTTGGATTAGGTCTAAG
CCCACACATTTGATACCTTTATCTAAAGCAATCTCCACCAGTTTCAACAAAAAGAGAAGC
AGCCCATGA

Peptide Sequence

PEP ID

XP_016515224.1
PEP Infomation

PREDICTED: putative pectinesterase 11 [Nicotiana tabacum]
Sequence

MAFHGYTAMVVVILAMSYLLICSEADSNTQLSTAILIKVDQSGNGDFKKIQDAIDAVPSH
NSQHIFISVKPGIYREKIVVPADKPFITISGRKPVNNTIITGNDFGDIFESSTFTVFASD
FVARHLTIQNTYGTGAKAVALRVEGDRVGFVGCRIKSHQDTLLDDVGRHYYKNCYIEGDT
DFICGNGASLFEKCHLHSLSEGNGAITAQHRQSSQENTGFTFVGCKITGVKSAILGRPWG
PYARVVFAQTYMSSVILPYGWEDWNVPSRQRTSYFAEYKCYGPGASSDKRVNWLRTLSSE
DAVPYLKESIMGPKSWIRSKPTHLIPLSKAISTSFNKKRSSP

Transcript Sequence

Gene sequence data has not been registered.